BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D11LP1|AL427012
(850 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1711 1624 0.0
>3x_Contig1711
Length = 15491
Score = 1624 bits (806), Expect = 0.0
Identities = 829/850 (97%)
Strand = Plus / Plus
Query: 1 gacgttctataccaaaatgctcaatatacacatttaaagctttcatgaattttcacatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13002 gacgttctataccaaaatgctcaatatacacatttaaagctttcatgaattttcacatct 13061
Query: 61 tgattgtgtgaattttcgaaagtttagcttgaaacctggttttgccaaacagagggactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13062 tgattgtgtgaattttcgaaagtttagcttgaaacctggttttgccaaacagagggactc 13121
Query: 121 aaaccacaaaccgaacacagctacctagagcaagcaccgtgaacgatggaaggcctggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13122 aaaccacaaaccgaacacagctacctagagcaagcaccgtgaacgatggaaggcctggga 13181
Query: 181 acagtcgacgccttcccactagctagtctgcaaactgggttgagagccaccgacagactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13182 acagtcgacgccttcccactagctagtctgcaaactgggttgagagccaccgacagactg 13241
Query: 241 cgagactctctgaggttaccagacctgattcccatagtacaakaggatggaaggatagtg 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 13242 cgagactctctgaggttaccagacctgattcccatagtacaataggatggaaggatagtg 13301
Query: 301 gacagattcagagtaggctaaacctggcagggaaccatccatgccagacagagaatccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13302 gacagattcagagtaggctaaacctggcagggaaccatccatgccagacagagaatccca 13361
Query: 361 ttccagaggaaggagcaccagcctacgataccacagttgggaagggcgcttacagaattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13362 ttccagaggaaggagcaccagcctacgataccacagttgggaagggcgcttacagaattg 13421
Query: 421 ctgatcgaatcaggccggtgccagtcatctgtkctgtctttktkkkkkkaatatcccctt 480
|||||||||||||||||||||||||||||||| |||||||| | |||||||||||
Sbjct: 13422 ctgatcgaatcaggccggtgccagtcatctgttctgtctttttttttttaatatcccctt 13481
Query: 481 ttggtaatggttcatttgttttacaaaatcaaaacaaaaaatgtactgatgttcatcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13482 ttggtaatggttcatttgttttacaaaatcaaaacaaaaaatgtactgatgttcatcttt 13541
Query: 541 aaacagtcccacaaatkagcacgtgakcaaaackkccctaactttcatttttcaagtatc 600
|||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 13542 aaacagtcccacaaattagcacgtgatcaaaacttccctaactttcatttttcaagtatc 13601
Query: 601 ttcgtcattgtcttcgtactggtgtctaactcgttattcgtgagcaacatgtwkaggaac 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 13602 ttcgtcattgtcttcgtactggtgtctaactcgttattcgtgagcaacatgtagaggaac 13661
Query: 661 gtagaggaatgtagaggaatttgttgaaattcaataactaagctttagactataacatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13662 gtagaggaatgtagaggaatttgttgaaattcaataactaagctttagactataacatct 13721
Query: 721 tctgtttcttgttgtgattgakatgaracataactgcgcattcttgttatatkgtkatwt 780
||||||||||||||||||||| |||| ||||||||||||||||||||||||| || || |
Sbjct: 13722 tctgtttcttgttgtgattgatatgaaacataactgcgcattcttgttatattgtaatat 13781
Query: 781 ggtagagtttgcaattgatttatctgtataccagatatataakcttgcgcataattcaca 840
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 13782 ggtagagtttgcaattgatttatctgtataccagatatataatcttgcgcataattcaca 13841
Query: 841 caaattaatg 850
||||||||||
Sbjct: 13842 caaattaatg 13851
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5387
Number of Sequences: 1807
Number of extensions: 5387
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 850
length of database: 10,358,551
effective HSP length: 16
effective length of query: 834
effective length of database: 10,329,639
effective search space: 8614918926
effective search space used: 8614918926
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)